ECOD: domain e1v5fA3

Domain ID e1v5fA3

A: a/b three-layered sandwiches
X: Thiamin diphosphate-binding fold (THDP-binding)
H: Thiamin diphosphate-binding fold (THDP-binding)
T: Thiamin diphosphate-binding fold (THDP-binding)
F: TPP_enzyme_C

UID:	000110936
Type:	Automatic domain
Parent:	e1pvdA3
Range:	A:364-588
Ligands:	FAD MG SO4 TPP
PDB:	1v5f
PDB Description:	PYRUVATE OXIDASE
Hsap BLAST neighbor:	A1L0T0
Species:	Aerococcus viridans

Domains in the same chain:

Download Pymol

e1v5fA2	A:4-177	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1v5fA1	A:187-360	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e1v5fA3	A:364-588	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e1v5fA2	A:4-177	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1v5fA1	A:187-360	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e1v5fA3	A:364-588	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e1v5fA3 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1v5fA3	A:x,y,z->A:-X+1,-Y,Z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e1v5fA2	A:x,y,z->A:-X+1,-Y,Z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e1v5fA2	A:-X+1,-Y,Z->A:x,y,z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e1v5fA3	A:-X+1,-Y,Z->A:x,y,z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e1v5fA3	A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/2	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e1v5fA3	A:X-1/2,-Y+1/2,-Z+1/2->A:x,y,z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e1v5fA1	A:X-1/2,-Y+1/2,-Z+1/2->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e1v5fA2	A:x,y,z->A:X-1,Y,Z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol