Domain ID e1v97B3

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  • A: a+b two layers
  • X: beta-Grasp
  • H: Ubiquitin-related
  • T: Ubiquitin-like
  • F: Fer2
UID: 000071972
Type: Automatic domain
Parent: e1wriA1
Range: B:3-92
Ligands: FAD FES
PDB: 1v97
PDB Description: XANTHINE DEHYDROGENASE
UniProt: P80457
Hsap BLAST neighbor: P47989
Species: Bos taurus

Structure of domain e1v97B3

Domains in the same chain:

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e1v97B3 B:3-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e1v97B1 B:93-165 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e1v97B5 B:192-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e1v97B4 B:415-528 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e1v97B6 B:537-694 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e1v97B7 B:695-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1v97B2 B:955-1332 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Domains in the same PDB:

e1v97A3 A:3-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e1v97A1 A:93-165 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e1v97A5 A:192-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e1v97A4 A:415-528 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e1v97A6 A:537-694 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e1v97A7 A:695-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1v97A8 A:955-1332 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1v97B3 B:3-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e1v97B1 B:93-165 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e1v97B5 B:192-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e1v97B4 B:415-528 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e1v97B6 B:537-694 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e1v97B7 B:695-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1v97B2 B:955-1332 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Structural contacts of domain e1v97B3 of H-group "Ubiquitin-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1v97A6 B:x,y,z->A:X,Y,Z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol