ECOD: domain e1v9kA1

Domain ID e1v9kA1

A: a+b two layers
X: Alpha-beta plaits
H: Pseudouridine synthase
T: Pseudouridine synthase
F: PseudoU_synth_2

UID:	000005397
Type:	Manual and representative domain
Range:	A:93-319
Ligands:	SO4
PDB:	1v9k
PDB Description:	Ribosomal large subunit pseudouridine synthase C
UniProt:	P0AA39
Hsap BLAST neighbor:	Q8IZ73
Species:	Escherichia coli

Domains in the same chain:

Download Pymol

e1v9kA1	A:93-319	Alpha-beta plaits	Pseudouridine synthase	Pseudouridine synthase

Domains in the same PDB:

e1v9kA1	A:93-319	Alpha-beta plaits	Pseudouridine synthase	Pseudouridine synthase
e1v9kB1	B:93-319	Alpha-beta plaits	Pseudouridine synthase	Pseudouridine synthase

Structural contacts of domain e1v9kA1 of H-group "Pseudouridine synthase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1v9kB1	A:X,Y,Z->B:x,y,z	Pseudouridine synthase	Interaction Interface Pymol
e1v9kA1	A:x,y,z->A:-Y+1,X-Y,Z-1/3	Pseudouridine synthase	Interaction Interface Pymol
e1v9kA1	A:-Y+1,X-Y,Z-1/3->A:x,y,z	Pseudouridine synthase	Interaction Interface Pymol
e1v9kB1	A:x,y,z->B:X-Y,-Y+1,-Z+1/3	Pseudouridine synthase	Interaction Interface Pymol
e1v9kA1	A:x,y,z->A:-X+2,-X+Y+1,-Z+2/3	Pseudouridine synthase	Interaction Interface Pymol
e1v9kA1	A:-X+2,-X+Y+1,-Z+2/3->A:x,y,z	Pseudouridine synthase	Interaction Interface Pymol
e1v9kB1	A:-X+2,-X+Y+1,-Z+2/3->B:x,y,z	Pseudouridine synthase	Interaction Interface Pymol
e1v9kB1	A:x,y,z->B:-Y+1,X-Y,Z-1/3	Pseudouridine synthase	Interaction Interface Pymol
e1v9kB1	A:Y,X-1,-Z->B:x,y,z	Pseudouridine synthase	Interaction Interface Pymol