ECOD: domain e1vbkA3

Domain ID e1vbkA3

A: a/b three-layered sandwiches
X: HUP domain-like
H: HUP domains
T: HUP domains
F: ThiI

UID:	000009862
Type:	Manual and representative domain
Range:	A:176-307
Ligands:	MRD
PDB:	1vbk
PDB Description:	HYPOTHETICAL PROTEIN PH1313
UniProt:	O59053
Species:

Domains in the same chain:

Download Pymol

e1vbkA1	A:1-77	Alpha-beta plaits	Ferredoxin-like domain in ThiI	Ferredoxin-like domain in ThiI
e1vbkA2	A:78-175	THUMP domain-like	THUMP domain-like	THUMP domain-like
e1vbkA3	A:176-307	HUP domain-like	HUP domains	HUP domains

Domains in the same PDB:

Structural contacts of domain e1vbkA3 of H-group "HUP domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1vbkB1	A:X,Y,Z->B:x,y,z	Ferredoxin-like domain in ThiI	Interaction Interface Pymol
e1vbkB3	A:X,Y,Z->B:x,y,z	HUP domains	Interaction Interface Pymol
e1vbkB3	A:x,y,z->B:-X+1,Y-1/2,-Z+1/2	HUP domains	Interaction Interface Pymol
e1vbkA2	A:x,y,z->A:-X+1/2,-Y,Z-1/2	THUMP domain-like	Interaction Interface Pymol
e1vbkB2	A:x,y,z->B:X-1/2,-Y-1/2,-Z	THUMP domain-like	Interaction Interface Pymol
e1vbkB3	A:-X+1,Y-1/2,-Z+1/2->B:x,y,z	HUP domains	Interaction Interface Pymol