Domain ID e1vcdA1

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  • A: a+b two layers
  • X: beta-Grasp
  • H: Nudix
  • T: Nudix
  • F: NUDIX
UID: 000006243
Type: Manual and representative domain
Range: A:1-126
Ligands: GOL SO4
PDB: 1vcd
PDB Description: NDX1
UniProt: Q75UV1
Hsap BLAST neighbor: P53370
Species:

Structure of domain e1vcdA1

Domains in the same chain:

e1vcdA1 A:1-126 beta-Grasp Nudix Nudix

Domains in the same PDB:

e1vcdA1 A:1-126 beta-Grasp Nudix Nudix
e1vcdB1 B:1-126 beta-Grasp Nudix Nudix

Structural contacts of domain e1vcdA1 of H-group "Nudix":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vcdB1 A:x,y,z->B:X-1/2,-Y+3/2,-Z+1 Nudix Interaction Interface Pymol
e1vcdB1 A:-X+2,Y-1/2,-Z+3/2->B:x,y,z Nudix Interaction Interface Pymol
e1vcdB1 A:X,Y,Z->B:x,y,z Nudix Interaction Interface Pymol
e1vcdB1 A:x,y,z->B:X-1,Y,Z Nudix Interaction Interface Pymol
e1vcdB1 A:X,Y-1,Z->B:x,y,z Nudix Interaction Interface Pymol