ECOD: domain e1vcgB1

Domain ID e1vcgB1

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: FMN_dh

UID:	000093127
Type:	Automatic domain
Parent:	e1kbiA2
Range:	B:23-332
Ligands:	FMN
PDB:	1vcg
PDB Description:	ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE
UniProt:	Q746I8
Species:	Thermus thermophilus

Domains in the same chain:

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e1vcgB1	B:23-332	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Domains in the same PDB:

e1vcgA1	A:23-332	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1vcgB1	B:23-332	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1vcgC1	C:23-332	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1vcgD1	D:23-332	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Structural contacts of domain e1vcgB1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1vcgC1	B:X,Y,Z->C:x,y,z	TIM barrels	Interaction Interface Pymol
e1vcgA1	B:x,y,z->A:X,Y,Z	TIM barrels	Interaction Interface Pymol
e1vcgC1	B:Y-1,X,-Z->C:x,y,z	TIM barrels	Interaction Interface Pymol
e1vcgA1	B:x,y,z->A:Y,X,-Z	TIM barrels	Interaction Interface Pymol
e1vcgA1	B:x,y,z->A:X-1/2,-Y+3/2,-Z+1/4	TIM barrels	Interaction Interface Pymol
e1vcgB1	B:x,y,z->B:Y,X,-Z	TIM barrels	Interaction Interface Pymol
e1vcgB1	B:Y,X,-Z->B:x,y,z	TIM barrels	Interaction Interface Pymol