ECOD: domain e1vdkA3

Domain ID e1vdkA3

A: alpha arrays
X: L-aspartase N-terminal domain-like
H: L-aspartase N-terminal domain-like
T: L-aspartase N-terminal domain-like
F: Lyase_1

UID:	000119087
Type:	Manual and representative domain
Range:	A:4-138
PDB:	1vdk
PDB Description:	FUMARATE HYDRATASE CLASS II
UniProt:	P84127
Hsap BLAST neighbor:	P07954
Species:

Domains in the same chain:

Download Pymol

e1vdkA3	A:4-138	L-aspartase N-terminal domain-like	L-aspartase N-terminal domain-like	L-aspartase N-terminal domain-like
e1vdkA1	A:139-393	L-aspartase middle domain-like	L-aspartase middle domain-like	L-aspartase middle domain-like
e1vdkA2	A:394-463	L-aspartase C-terminal domain-like	L-aspartase C-terminal domain-like	L-aspartase C-terminal domain-like

Domains in the same PDB:

e1vdkA3	A:4-138	L-aspartase N-terminal domain-like	L-aspartase N-terminal domain-like	L-aspartase N-terminal domain-like
e1vdkA1	A:139-393	L-aspartase middle domain-like	L-aspartase middle domain-like	L-aspartase middle domain-like
e1vdkA2	A:394-463	L-aspartase C-terminal domain-like	L-aspartase C-terminal domain-like	L-aspartase C-terminal domain-like
e1vdkB3	B:4-138	L-aspartase N-terminal domain-like	L-aspartase N-terminal domain-like	L-aspartase N-terminal domain-like
e1vdkB1	B:139-393	L-aspartase middle domain-like	L-aspartase middle domain-like	L-aspartase middle domain-like
e1vdkB2	B:394-463	L-aspartase C-terminal domain-like	L-aspartase C-terminal domain-like	L-aspartase C-terminal domain-like

Structural contacts of domain e1vdkA3 of H-group "L-aspartase N-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1vdkB1	A:-X+1,Y,-Z+1/2->B:x,y,z	L-aspartase middle domain-like	Interaction Interface Pymol
e1vdkA1	A:x,y,z->A:-X+1,Y,-Z+1/2	L-aspartase middle domain-like	Interaction Interface Pymol
e1vdkA3	A:x,y,z->A:-X+1,Y,-Z+1/2	L-aspartase N-terminal domain-like	Interaction Interface Pymol
e1vdkA1	A:-X+1,Y,-Z+1/2->A:x,y,z	L-aspartase middle domain-like	Interaction Interface Pymol
e1vdkA3	A:-X+1,Y,-Z+1/2->A:x,y,z	L-aspartase N-terminal domain-like	Interaction Interface Pymol
e1vdkB3	A:x,y,z->B:-X+1/2,Y-1/2,-Z+1/2	L-aspartase N-terminal domain-like	Interaction Interface Pymol
e1vdkB1	A:-X+1,-Y,Z-1/2->B:x,y,z	L-aspartase middle domain-like	Interaction Interface Pymol
e1vdkA2	A:x,y,z->A:X-1/2,Y-1/2,Z	L-aspartase C-terminal domain-like	Interaction Interface Pymol