ECOD: domain e1vfgB1

Domain ID e1vfgB1

A: alpha complex topology
X: PDEase-like
H: Poly A polymerase C-terminal region-like
T: Poly A polymerase C-terminal region-like
F: Unmapped domains

UID:	000061505
Type:	Automatic domain
Parent:	e1ou5A1
Range:	B:137-351
Ligands:	APC
PDB:	1vfg
PDB Description:	POLY A POLYMERASE
UniProt:	O66728
Species:	Aquifex aeolicus

Domain
In chain context
In PDB context

Structure of domain e1vfgB1

Domains in the same chain:

Download Pymol

e1vfgB2	B:1-136	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e1vfgB1	B:137-351	PDEase-like	Poly A polymerase C-terminal region-like	Poly A polymerase C-terminal region-like

Domains in the same PDB:

e1vfgA2	A:1-136	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e1vfgA1	A:137-351	PDEase-like	Poly A polymerase C-terminal region-like	Poly A polymerase C-terminal region-like
e1vfgB2	B:1-136	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e1vfgB1	B:137-351	PDEase-like	Poly A polymerase C-terminal region-like	Poly A polymerase C-terminal region-like

Structural contacts of domain e1vfgB1 of H-group "Poly A polymerase C-terminal region-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1vfgA2	B:x,y,z->A:-X+1,Y,-Z	Nucleotidyltransferase	Interaction Interface Pymol
e1vfgA2	B:X-1,Y,Z->A:x,y,z	Nucleotidyltransferase	Interaction Interface Pymol
e1vfgB1	B:x,y,z->B:-X+2,Y,-Z+1	Poly A polymerase C-terminal region-like	Interaction Interface Pymol
e1vfgB1	B:-X+2,Y,-Z+1->B:x,y,z	Poly A polymerase C-terminal region-like	Interaction Interface Pymol