Domain ID e1vfnA1

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  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 000105833
Type: Automatic domain
Parent: e3pnpA1
Range: A:4-282
Ligands: HPA MG ZN
PDB: 1vfn
PDB Description: PURINE-NUCLEOSIDE PHOSPHORYLASE
UniProt: P55859
Hsap BLAST neighbor: P00491
Species: Bos taurus

Structure of domain e1vfnA1

Structural contacts of domain e1vfnA1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vfnA1 A:x,y,z->A:Z+1/2,-X+3/2,-Y+1 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1vfnA1 A:Z+1/2,-X+3/2,-Y+1->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1vfnA1 A:x,y,z->A:-Z+1,X-1/2,-Y+1/2 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1vfnA1 A:-Z+1,X-1/2,-Y+1/2->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1vfnA1 A:x,y,z->A:-Z+3/2,-X+1,Y+1/2 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1vfnA1 A:-Z+3/2,-X+1,Y+1/2->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol