ECOD: domain e1vgoA1

Domain ID e1vgoA1

A: alpha bundles
X: Family A G protein-coupled receptor-like
H: Family A G protein-coupled receptor-like
T: Family A G protein-coupled receptor-like
F: Bac_rhodopsin

UID:	000158328
Type:	Automatic domain
Parent:	e1m0kA1
Range:	A:5-237
Ligands:	BNG RET SO4
PDB:	1vgo
PDB Description:	ARCHAERHODOPSIN 2
UniProt:	P29563
Species:	Halobacterium sp. AUS-2

Domains in the same chain:

Download Pymol

e1vgoA1	A:5-237	Family A G protein-coupled receptor-like	Family A G protein-coupled receptor-like	Family A G protein-coupled receptor-like

Domains in the same PDB:

e1vgoA1	A:5-237	Family A G protein-coupled receptor-like	Family A G protein-coupled receptor-like	Family A G protein-coupled receptor-like
e1vgoB1	B:5-239	Family A G protein-coupled receptor-like	Family A G protein-coupled receptor-like	Family A G protein-coupled receptor-like

Structural contacts of domain e1vgoA1 of H-group "Family A G protein-coupled receptor-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1vgoA1	A:x,y,z->A:X,-Y,-Z+1	Family A G protein-coupled receptor-like	Interaction Interface Pymol
e1vgoA1	A:X,-Y,-Z+1->A:x,y,z	Family A G protein-coupled receptor-like	Interaction Interface Pymol
e1vgoB1	A:X,Y,Z->B:x,y,z	Family A G protein-coupled receptor-like	Interaction Interface Pymol
e1vgoB1	A:-X+1/2,-Y+1/2,Z-1/2->B:x,y,z	Family A G protein-coupled receptor-like	Interaction Interface Pymol
e1vgoB1	A:-X,Y,-Z+1/2->B:x,y,z	Family A G protein-coupled receptor-like	Interaction Interface Pymol
e1vgoA1	A:x,y,z->A:-X,Y,-Z+3/2	Family A G protein-coupled receptor-like	Interaction Interface Pymol
e1vgoA1	A:-X,Y,-Z+3/2->A:x,y,z	Family A G protein-coupled receptor-like	Interaction Interface Pymol