Domain ID e1vgtB1

Download files:
  • A: a/b three-layered sandwiches
  • X: Nucleotide-diphospho-sugar transferases
  • H: Nucleotide-diphospho-sugar transferases
  • T: Nucleotide-diphospho-sugar transferases
  • F: IspD
UID: 000107181
Type: Automatic domain
Parent: e1i52A1
Range: B:6-229
PDB: 1vgt
PDB Description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
UniProt: Q46893
Hsap BLAST neighbor: A4D126
Species: Escherichia coli

Structure of domain e1vgtB1

Structural contacts of domain e1vgtB1 of H-group "Nucleotide-diphospho-sugar transferases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vgtA1 B:x,y,z->A:X,Y,Z Nucleotide-diphospho-sugar transferases Interaction Interface Pymol
e1vgtA1 B:x,y,z->A:-X+3/2,-Y+1,Z-1/2 Nucleotide-diphospho-sugar transferases Interaction Interface Pymol
e1vgtA1 B:-X+2,Y-1/2,-Z+1/2->A:x,y,z Nucleotide-diphospho-sugar transferases Interaction Interface Pymol
e1vgtA1 B:-X+1,Y-1/2,-Z+1/2->A:x,y,z Nucleotide-diphospho-sugar transferases Interaction Interface Pymol
e1vgtB1 B:x,y,z->B:X-1,Y,Z Nucleotide-diphospho-sugar transferases Interaction Interface Pymol
e1vgtB1 B:X-1,Y,Z->B:x,y,z Nucleotide-diphospho-sugar transferases Interaction Interface Pymol
e1vgtA1 B:x,y,z->A:-X+2,Y-1/2,-Z+1/2 Nucleotide-diphospho-sugar transferases Interaction Interface Pymol
e1vgtB1 B:x,y,z->B:-X+2,Y-1/2,-Z+1/2 Nucleotide-diphospho-sugar transferases Interaction Interface Pymol
e1vgtB1 B:-X+2,Y-1/2,-Z+1/2->B:x,y,z Nucleotide-diphospho-sugar transferases Interaction Interface Pymol