Domain ID e1vhaD1

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  • A: a+b three layers
  • X: Bacillus chorismate mutase-like
  • H: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF
  • T: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF
  • F: YgbB
UID: 000079220
Type: Automatic domain
Parent: e1iv3A1
Range: D:1-158
Ligands: ACY MN POP
PDB: 1vha
PDB Description: 2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE
UniProt: P44815
Species: Haemophilus influenzae

Structure of domain e1vhaD1

Structural contacts of domain e1vhaD1 of H-group "2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vhaE1 D:X,Y,Z->E:x,y,z 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1vhaF1 D:X,Y,Z->F:x,y,z 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1vhaB1 D:x,y,z->B:-Y+3/2,X-1,Z-1/4 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1vhaC1 D:-Y+1,X-1/2,Z+1/4->C:x,y,z 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1vhaE1 D:x,y,z->E:-Y+1/2,X-1,Z-1/4 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1vhaD1 D:x,y,z->D:-X+1,-Y,Z 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol
e1vhaD1 D:-X+1,-Y,Z->D:x,y,z 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF Interaction Interface Pymol