ECOD: domain e1vhkC2

Domain ID e1vhkC2

A: a/b three-layered sandwiches
X: alpha/beta knot
H: alpha/beta knot
T: alpha/beta knot
F: Methyltrans_RNA

UID:	000113968
Type:	Automatic domain
Parent:	e1nxzA2
Range:	C:74-253
PDB:	1vhk
PDB Description:	Hypothetical protein yqeU
UniProt:	P54461
Species:	Bacillus subtilis

Domains in the same chain:

Download Pymol

e1vhkC1	C:2-73	cradle loop barrel	RIFT-related	PUA domain
e1vhkC2	C:74-253	alpha/beta knot	alpha/beta knot	alpha/beta knot

Domains in the same PDB:

e1vhkA1	A:2-73	cradle loop barrel	RIFT-related	PUA domain
e1vhkA2	A:74-253	alpha/beta knot	alpha/beta knot	alpha/beta knot
e1vhkB1	B:2-10,B:40-73	cradle loop barrel	RIFT-related	PUA domain
e1vhkB2	B:74-253	alpha/beta knot	alpha/beta knot	alpha/beta knot
e1vhkC1	C:2-73	cradle loop barrel	RIFT-related	PUA domain
e1vhkC2	C:74-253	alpha/beta knot	alpha/beta knot	alpha/beta knot
e1vhkD1	D:74-253	alpha/beta knot	alpha/beta knot	alpha/beta knot

Structural contacts of domain e1vhkC2 of H-group "alpha/beta knot":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1vhkD1	C:X,Y,Z->D:x,y,z	alpha/beta knot	Interaction Interface Pymol
e1vhkB2	C:X,Y,Z->B:x,y,z	alpha/beta knot	Interaction Interface Pymol
e1vhkA1	C:X,Y,Z-1->A:x,y,z	RIFT-related	Interaction Interface Pymol
e1vhkD1	C:x,y,z->D:X-1,Y,Z	alpha/beta knot	Interaction Interface Pymol
e1vhkA2	C:-X+1,Y-1/2,-Z+2->A:x,y,z	alpha/beta knot	Interaction Interface Pymol