| UID: | 000103982 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1c3pA1 |
| Range: | B:15-377 |
| Ligands: | CRI NA ZN |
| DrugDomain: | DB07586 |
| PDB: | 1vkg |
| PDB Description: | HISTONE DEACETYLASE 8 |
| UniProt: | Q9BY41 |
| Hsap BLAST neighbor: | Q9BY41 |
| Species: | Homo sapiens |
Structure of domain e1vkgB1
Domains in the same chain:
| e1vkgB1 | B:15-377 | HAD domain-like | HAD domain-related | Arginase/deacetylase |
Domains in the same PDB:
| e1vkgA1 | A:15-377 | HAD domain-like | HAD domain-related | Arginase/deacetylase |
| e1vkgB1 | B:15-377 | HAD domain-like | HAD domain-related | Arginase/deacetylase |
Structural contacts of domain e1vkgB1 of H-group "HAD domain-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1vkgA1 | B:x,y,z->A:X,Y,Z | HAD domain-related | Interaction Interface Pymol |
| e1vkgA1 | B:x,y,z->A:X-1/2,-Y+3/2,-Z+2 | HAD domain-related | Interaction Interface Pymol |
| e1vkgB1 | B:x,y,z->B:-X,Y-1/2,-Z+3/2 | HAD domain-related | Interaction Interface Pymol |
| e1vkgB1 | B:-X,Y-1/2,-Z+3/2->B:x,y,z | HAD domain-related | Interaction Interface Pymol |
| e1vkgA1 | B:-X+1/2,-Y+1,Z-1/2->A:x,y,z | HAD domain-related | Interaction Interface Pymol |
| e1vkgA1 | B:x,y,z->A:-X,Y-1/2,-Z+3/2 | HAD domain-related | Interaction Interface Pymol |
| e1vkgA1 | B:x,y,z->A:X-1/2,-Y+3/2,-Z+1 | HAD domain-related | Interaction Interface Pymol |
| e1vkgA1 | B:-X,Y-1/2,-Z+3/2->A:x,y,z | HAD domain-related | Interaction Interface Pymol |
