ECOD: domain e1vkxB1

Domain ID e1vkxB1

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: RHD_dimer

UID:	000032487
Type:	Automatic domain
Parent:	e1p7hL1
Range:	B:547-650
PDB:	1vkx
PDB Description:	PROTEIN (NF-KAPPA B P50 SUBUNIT)
UniProt:	P25799
Hsap BLAST neighbor:	P19838
Species:	Mus musculus

Domain
In chain context
In PDB context

Structure of domain e1vkxB1

Domains in the same chain:

Download Pymol

e1vkxB2	B:339-546	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e1vkxB1	B:547-650	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1vkxA2	A:20-189	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e1vkxA1	A:192-291	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1vkxB2	B:339-546	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e1vkxB1	B:547-650	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e1vkxB1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1vkxA2	B:x,y,z->A:-Y+1/2,X+1/2,Z-1/4	Immunoglobulin-related	Interaction Interface Pymol
e1vkxA1	B:x,y,z->A:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol