| UID: | 000008778 |
|---|---|
| Type: | Manual and representative domain |
| Range: | A:2-296 |
| Ligands: | ZN |
| PDB: | 1vli |
| PDB Description: | Spore coat polysaccharide biosynthesis protein spsE |
| UniProt: | P39625 |
| Hsap BLAST neighbor: | Q9NR45 |
| Species: | Bacillus subtilis |
Structure of domain e1vliA2
Domains in the same chain:
| e1vliA2 | A:2-296 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e1vliA1 | A:297-368 | beta-clip | SET domain-like | SET domain-like |
Domains in the same PDB:
| e1vliA2 | A:2-296 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e1vliA1 | A:297-368 | beta-clip | SET domain-like | SET domain-like |
Structural contacts of domain e1vliA2 of H-group "TIM barrels":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1vliA2 | A:x,y,z->A:-X,-X+Y,-Z+2/3 | TIM barrels | Interaction Interface Pymol |
| e1vliA1 | A:x,y,z->A:-X,-X+Y,-Z+2/3 | SET domain-like | Interaction Interface Pymol |
| e1vliA1 | A:-X,-X+Y,-Z+2/3->A:x,y,z | SET domain-like | Interaction Interface Pymol |
| e1vliA2 | A:-X,-X+Y,-Z+2/3->A:x,y,z | TIM barrels | Interaction Interface Pymol |
| e1vliA2 | A:x,y,z->A:Y,X,-Z+1 | TIM barrels | Interaction Interface Pymol |
| e1vliA2 | A:Y,X,-Z+1->A:x,y,z | TIM barrels | Interaction Interface Pymol |
| e1vliA1 | A:X,Y-1,Z->A:x,y,z | SET domain-like | Interaction Interface Pymol |
