ECOD: domain e1vliA2

Domain ID e1vliA2

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: NeuB

UID:	000008778
Type:	Manual and representative domain
Range:	A:2-296
Ligands:	ZN
PDB:	1vli
PDB Description:	Spore coat polysaccharide biosynthesis protein spsE
UniProt:	P39625
Hsap BLAST neighbor:	Q9NR45
Species:	Bacillus subtilis

Domains in the same chain:

Download Pymol

e1vliA2	A:2-296	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1vliA1	A:297-368	beta-clip	SET domain-like	SET domain-like

Domains in the same PDB:

e1vliA2	A:2-296	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1vliA1	A:297-368	beta-clip	SET domain-like	SET domain-like

Structural contacts of domain e1vliA2 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1vliA2	A:x,y,z->A:-X,-X+Y,-Z+2/3	TIM barrels	Interaction Interface Pymol
e1vliA1	A:x,y,z->A:-X,-X+Y,-Z+2/3	SET domain-like	Interaction Interface Pymol
e1vliA1	A:-X,-X+Y,-Z+2/3->A:x,y,z	SET domain-like	Interaction Interface Pymol
e1vliA2	A:-X,-X+Y,-Z+2/3->A:x,y,z	TIM barrels	Interaction Interface Pymol
e1vliA2	A:x,y,z->A:Y,X,-Z+1	TIM barrels	Interaction Interface Pymol
e1vliA2	A:Y,X,-Z+1->A:x,y,z	TIM barrels	Interaction Interface Pymol
e1vliA1	A:X,Y-1,Z->A:x,y,z	SET domain-like	Interaction Interface Pymol