ECOD: domain e1vm6A2

Domain ID e1vm6A2

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: NAD(P)-binding Rossmann-fold domains
F: DapB_N

UID:	000009120
Type:	Manual and representative domain
Range:	A:1-96,A:183-214
Ligands:	ACT NAD
PDB:	1vm6
PDB Description:	Dihydrodipicolinate reductase
UniProt:	Q9X1K8
Species:	Thermotoga maritima

Domain
In chain context
In PDB context

Structure of domain e1vm6A2

Domains in the same chain:

Download Pymol

e1vm6A2	A:1-96,A:183-214	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e1vm6A1	A:97-182	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain

Domains in the same PDB:

e1vm6A2	A:1-96,A:183-214	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e1vm6A1	A:97-182	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e1vm6B2	B:1-96,B:183-213	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e1vm6B1	B:97-182	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e1vm6C2	C:1-96,C:183-214	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e1vm6C1	C:97-182	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e1vm6D2	D:1-96,D:183-213	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e1vm6D1	D:97-182	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain

Structural contacts of domain e1vm6A2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1vm6D1	A:X,Y,Z->D:x,y,z	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	Interaction Interface Pymol
e1vm6D2	A:-X+1/2,Y-1/2,-Z->D:x,y,z	Rossmann-related	Interaction Interface Pymol
e1vm6B2	A:X,Y,Z->B:x,y,z	Rossmann-related	Interaction Interface Pymol