ECOD: domain e1vmaA2

Domain ID e1vmaA2

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: SRP54

UID:	000102090
Type:	Automatic domain
Parent:	e1ls1A2
Range:	A:84-294
Ligands:	MG
PDB:	1vma
PDB Description:	CELL DIVISION PROTEIN FTSY
UniProt:	Q9WZ40
Hsap BLAST neighbor:	P61011
Species:	Thermotoga maritima

Domains in the same chain:

Download Pymol

e1vmaA1	A:1-81	Domain of the SRP/SRP receptor G proteins-like	Domain of the SRP/SRP receptor G-proteins	Domain of the SRP/SRP receptor G-proteins
e1vmaA2	A:84-294	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e1vmaA1	A:1-81	Domain of the SRP/SRP receptor G proteins-like	Domain of the SRP/SRP receptor G-proteins	Domain of the SRP/SRP receptor G-proteins
e1vmaA2	A:84-294	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1vmaB1	B:1-81	Domain of the SRP/SRP receptor G proteins-like	Domain of the SRP/SRP receptor G-proteins	Domain of the SRP/SRP receptor G-proteins
e1vmaB2	B:84-294	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e1vmaA2 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1vmaB2	A:X,Y,Z->B:x,y,z	P-loop domains-related	Interaction Interface Pymol
e1vmaB1	A:X,Y,Z->B:x,y,z	Domain of the SRP/SRP receptor G-proteins	Interaction Interface Pymol
e1vmaA1	A:x,y,z->A:-X,Y-1/2,-Z	Domain of the SRP/SRP receptor G-proteins	Interaction Interface Pymol
e1vmaA1	A:-X,Y-1/2,-Z->A:x,y,z	Domain of the SRP/SRP receptor G-proteins	Interaction Interface Pymol
e1vmaA2	A:x,y,z->A:-X,Y-1/2,-Z+1	P-loop domains-related	Interaction Interface Pymol
e1vmaA2	A:-X,Y-1/2,-Z+1->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e1vmaB2	A:x,y,z->B:X-1,Y,Z	P-loop domains-related	Interaction Interface Pymol