Domain ID e1vmkA1

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  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 000105843
Type: Automatic domain
Parent: e3pnpA1
Range: A:1-265
Ligands: GUN
PDB: 1vmk
PDB Description: purine nucleoside phosphorylase
UniProt: Q9X1T2
Hsap BLAST neighbor: P00491
Species:

Structure of domain e1vmkA1

Structural contacts of domain e1vmkA1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vmkC1 A:X,Y,Z->C:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1vmkB1 A:X,Y,Z->B:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1vmkB1 A:X-1,Y,Z-1->B:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1vmkB1 A:X,Y,Z-1->B:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1vmkC1 A:X,Y-1,Z-1->C:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1vmkA1 A:x,y,z->A:X-1,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1vmkA1 A:X-1,Y,Z->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol