| UID: | 000055250 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1vp7A1 |
| Range: | D:13-80 |
| PDB: | 1vp7 |
| PDB Description: | exodeoxyribonuclease VII small subunit |
| UniProt: | Q7W7Q2 |
| Species: |
Structure of domain e1vp7D1
Domains in the same chain:
| e1vp7D1 | D:13-80 | Spectrin repeat-like | XseB-like | XseB-like |
Domains in the same PDB:
| e1vp7A1 | A:13-80 | Spectrin repeat-like | XseB-like | XseB-like |
| e1vp7B1 | B:13-80 | Spectrin repeat-like | XseB-like | XseB-like |
| e1vp7C1 | C:13-79 | Spectrin repeat-like | XseB-like | XseB-like |
| e1vp7D1 | D:13-80 | Spectrin repeat-like | XseB-like | XseB-like |
| e1vp7E1 | E:13-79 | Spectrin repeat-like | XseB-like | XseB-like |
| e1vp7F1 | F:13-79 | Spectrin repeat-like | XseB-like | XseB-like |
Structural contacts of domain e1vp7D1 of H-group "XseB-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1vp7C1 | D:x,y,z->C:X,Y,Z | XseB-like | Interaction Interface Pymol |
| e1vp7D1 | D:x,y,z->D:X,X-Y+1,-Z+1 | XseB-like | Interaction Interface Pymol |
| e1vp7D1 | D:X,X-Y+1,-Z+1->D:x,y,z | XseB-like | Interaction Interface Pymol |
| e1vp7D1 | D:x,y,z->D:X-Y+1,-Y+2,-Z+1 | XseB-like | Interaction Interface Pymol |
| e1vp7D1 | D:X-Y+1,-Y+2,-Z+1->D:x,y,z | XseB-like | Interaction Interface Pymol |
| e1vp7A1 | D:x,y,z->A:X-Y+1,X,Z | XseB-like | Interaction Interface Pymol |
| e1vp7C1 | D:x,y,z->C:X-Y+1,-Y+2,-Z+1 | XseB-like | Interaction Interface Pymol |
| e1vp7C1 | D:x,y,z->C:X-Y+1,X,Z | XseB-like | Interaction Interface Pymol |
| e1vp7D1 | D:x,y,z->D:-X+Y,Y,-Z+1 | XseB-like | Interaction Interface Pymol |
| e1vp7D1 | D:-X+Y,Y,-Z+1->D:x,y,z | XseB-like | Interaction Interface Pymol |
