Domain ID e1vpnC1

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • F: Polyoma_coat
UID: 000030812
Type: Automatic domain
Parent: e1vpsA1
Range: C:32-316
PDB: 1vpn
PDB Description: POLYOMAVIRUS VP1 PENTAMER
UniProt: P49302
Species: Murine polyomavirus

Structure of domain e1vpnC1

Structural contacts of domain e1vpnC1 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vpnB1 C:x,y,z->B:X,Y,Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e1vpnD1 C:X,Y,Z->D:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e1vpnC1 C:x,y,z->C:X-Y+1,-Y+2,-Z-1/3 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e1vpnC1 C:X-Y+1,-Y+2,-Z-1/3->C:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e1vpnD1 C:x,y,z->D:-Y+1,X-Y+1,Z+1/3 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e1vpnA1 C:-Y+1,X-Y+1,Z+1/3->A:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e1vpnB1 C:-Y+1,X-Y+1,Z+1/3->B:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol