Domain ID e1vt2J1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L13/L15p/L18e/L32e
  • H: Ribosomal protein L13 and L16-A
  • T: Ribosomal protein L13 and L16-A
  • F: Ribosomal_L13
UID: 000140860
Type: Automatic domain
Parent: e4v19N1
Range: J:1-142
PDB: 1vt2
PDB Description:
Hsap BLAST neighbor: Q9BYD1
Species:

Structure of domain e1vt2J1

Domains in the same chain:

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e1vt2J1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A

Domains in the same PDB:

e1vt201 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e1vt221 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e1vt231 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e1vt241 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e1vt2C3 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1vt2C4 C:125-271 SH3 SH3 SH3
e1vt2E1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e1vt2F1 F:1-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e1vt2G2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1vt2G1 G:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1vt2H2 H:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e1vt2I2 I:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e1vt2I1 I:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e1vt2J1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e1vt2K1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e1vt2N1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e1vt2O1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1vt2R1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e1vt2S1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e1vt2T1 T:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e1vt2U1 U:1-102 SH3 SH3 SH3
e1vt2V1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e1vt2W1 W:6-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e1vt2X1 X:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e1vt2Y1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e1vt2Z1 Z:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e1vt2J1 of H-group "Ribosomal protein L13 and L16-A":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4v19N1 J:X,Y,Z->Q:x,y,z Ribosomal protein L13 and L16-A Interaction Interface Pymol
e4v19N1 J:x,y,z->D:X,Y,Z Ribosomal protein L13 and L16-A Interaction Interface Pymol