Domain ID e1vu5W2

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  • A: alpha bundles
  • X: Retrovirus capsid protein
  • H: Retrovirus capsid protein N-terminal domain
  • T: Retrovirus capsid protein N-terminal domain
  • F: Gag_p24
UID: 001012158
Type: Automatic domain
Parent: e2pxrC1
Range: W:1-148
PDB: 1vu5
PDB Description:
Species:

Structure of domain e1vu5W2

Domains in the same chain:

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e1vu5W2 W:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5W1 W:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C

Domains in the same PDB:

e1vu502 0:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu501 0:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu513 1:1-146 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu514 1:147-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu522 2:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu521 2:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5a2 a:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5a1 a:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5A2 A:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5A1 A:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5b2 b:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5b1 b:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5B2 B:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5B1 B:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5c2 c:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5c1 c:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5C2 C:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5C1 C:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5d2 d:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5d1 d:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5D2 D:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5D1 D:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5e2 e:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5e1 e:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5E2 E:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5E1 E:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5f3 f:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5f4 f:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5F2 F:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5F1 F:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5g2 g:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5g1 g:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5G2 G:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5G1 G:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5h2 h:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5h1 h:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5H3 H:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5H4 H:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5i2 i:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5i1 i:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5I2 I:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5I1 I:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5j2 j:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5j1 j:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5J2 J:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5J1 J:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5k2 k:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5k1 k:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5K2 K:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5K1 K:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5l2 l:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5l1 l:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5L2 L:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5L1 L:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5m2 m:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5m1 m:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5M2 M:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5M1 M:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5n2 n:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5n1 n:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5N2 N:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5N1 N:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5o2 o:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5o1 o:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5O2 O:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5O1 O:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5p2 p:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5p1 p:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5P2 P:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5P1 P:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5q2 q:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5q1 q:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5Q2 Q:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5Q1 Q:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5r2 r:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5r1 r:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5R2 R:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5R1 R:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5s2 s:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5s1 s:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5S2 S:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5S1 S:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5t2 t:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5t1 t:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5T2 T:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5T1 T:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5u2 u:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5u1 u:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5U2 U:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5U1 U:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5v3 v:1-146 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5v4 v:147-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5V2 V:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5V1 V:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5w2 w:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5w1 w:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5W2 W:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5W1 W:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5x2 x:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5x1 x:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5X2 X:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5X1 X:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5y2 y:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5y1 y:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5Y2 Y:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5Y1 Y:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5z2 z:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5z1 z:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vu5Z3 Z:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vu5Z4 Z:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C

Structural contacts of domain e1vu5W2 of H-group "Retrovirus capsid protein N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vu5X2 W:X,Y,Z->X:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1vu5X1 W:X,Y,Z->X:x,y,z Retrovirus capsid protein-C Interaction Interface Pymol
e1vu5U2 W:X,Y,Z->U:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol