Domain ID e1vugU1

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  • A: alpha bundles
  • X: Retrovirus capsid protein
  • H: Retrovirus capsid protein-C
  • T: Retrovirus capsid protein-C
  • F: Gag_p24_C
UID: 001010685
Type: Automatic domain
Parent: e1a8oA1
Range: U:149-231
PDB: 1vug
PDB Description:
Hsap BLAST neighbor: P63145
Species:

Structure of domain e1vugU1

Domains in the same chain:

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e1vugU2 U:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugU1 U:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C

Domains in the same PDB:

e1vug02 0:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vug01 0:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vug12 1:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vug11 1:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vug22 2:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vug21 2:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vuga2 a:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vuga1 a:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugA2 A:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugA1 A:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugb2 b:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugb1 b:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugB2 B:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugB1 B:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugc2 c:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugc1 c:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugC2 C:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugC1 C:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugd2 d:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugd1 d:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugD2 D:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugD1 D:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vuge2 e:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vuge1 e:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugE3 E:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugE4 E:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugf2 f:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugf1 f:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugF2 F:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugF1 F:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugg2 g:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugg1 g:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugG2 G:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugG1 G:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugh2 h:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugh1 h:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugH2 H:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugH1 H:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugi2 i:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugi1 i:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugI2 I:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugI1 I:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugj2 j:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugj1 j:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugJ2 J:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugJ1 J:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugk3 k:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugk4 k:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugK2 K:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugK1 K:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugl2 l:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugl1 l:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugL2 L:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugL1 L:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugm2 m:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugm1 m:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugM2 M:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugM1 M:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugn2 n:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugn1 n:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugN2 N:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugN1 N:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugo2 o:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugo1 o:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugO2 O:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugO1 O:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugp2 p:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugp1 p:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugP2 P:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugP1 P:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugq2 q:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugq1 q:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugQ2 Q:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugQ1 Q:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugr2 r:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugr1 r:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugR2 R:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugR1 R:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugs2 s:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugs1 s:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugS3 S:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugS4 S:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugt2 t:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugt1 t:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugT3 T:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugT4 T:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugu2 u:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugu1 u:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugU2 U:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugU1 U:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugv2 v:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugv1 v:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugV2 V:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugV1 V:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugw2 w:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugw1 w:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugW2 W:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugW1 W:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugx2 x:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugx1 x:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugX2 X:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugX1 X:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugy2 y:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugy1 y:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugY2 Y:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugY1 Y:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugz2 z:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugz1 z:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vugZ2 Z:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vugZ1 Z:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C

Structural contacts of domain e1vugU1 of H-group "Retrovirus capsid protein-C":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vugT4 U:x,y,z->T:X,Y,Z Retrovirus capsid protein-C Interaction Interface Pymol
e1vugT3 U:x,y,z->T:X,Y,Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol