Domain ID e1vv4U2

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  • A: alpha bundles
  • X: Retrovirus capsid protein
  • H: Retrovirus capsid protein N-terminal domain
  • T: Retrovirus capsid protein N-terminal domain
  • F: Gag_p24
UID: 001011274
Type: Automatic domain
Parent: e2pxrC1
Range: U:1-148
PDB: 1vv4
PDB Description:
Species:

Structure of domain e1vv4U2

Domains in the same chain:

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e1vv4U2 U:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4U1 U:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C

Domains in the same PDB:

e1vv402 0:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv401 0:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv412 1:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv411 1:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv422 2:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv421 2:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4a2 a:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4a1 a:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4A2 A:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4A1 A:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4b2 b:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4b1 b:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4B2 B:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4B1 B:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4c2 c:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4c1 c:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4C2 C:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4C1 C:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4d2 d:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4d1 d:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4D2 D:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4D1 D:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4e2 e:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4e1 e:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4E2 E:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4E1 E:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4f3 f:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4f4 f:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4F3 F:1-146 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4F4 F:147-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4g2 g:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4g1 g:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4G2 G:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4G1 G:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4h2 h:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4h1 h:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4H2 H:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4H1 H:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4i2 i:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4i1 i:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4I2 I:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4I1 I:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4j2 j:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4j1 j:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4J2 J:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4J1 J:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4k2 k:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4k1 k:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4K2 K:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4K1 K:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4l2 l:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4l1 l:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4L2 L:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4L1 L:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4m2 m:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4m1 m:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4M2 M:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4M1 M:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4n2 n:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4n1 n:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4N3 N:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4N4 N:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4o2 o:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4o1 o:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4O3 O:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4O4 O:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4p2 p:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4p1 p:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4P2 P:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4P1 P:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4q2 q:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4q1 q:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4Q2 Q:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4Q1 Q:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4r2 r:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4r1 r:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4R2 R:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4R1 R:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4s2 s:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4s1 s:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4S2 S:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4S1 S:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4t2 t:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4t1 t:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4T2 T:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4T1 T:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4u2 u:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4u1 u:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4U2 U:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4U1 U:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4v3 v:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4v4 v:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4V2 V:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4V1 V:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4w2 w:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4w1 w:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4W2 W:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4W1 W:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4x2 x:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4x1 x:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4X2 X:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4X1 X:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4y2 y:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4y1 y:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4Y2 Y:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4Y1 Y:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4z2 z:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4z1 z:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv4Z2 Z:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv4Z1 Z:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C

Structural contacts of domain e1vv4U2 of H-group "Retrovirus capsid protein N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vv4V2 U:X,Y,Z->V:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1vv4V1 U:X,Y,Z->V:x,y,z Retrovirus capsid protein-C Interaction Interface Pymol
e1vv4T2 U:X,Y,Z->T:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol