Domain ID e1vv6f1

Download files:
  • A: alpha bundles
  • X: Retrovirus capsid protein
  • H: Retrovirus capsid protein-C
  • T: Retrovirus capsid protein-C
  • F: Gag_p24_C
UID: 001012547
Type: Automatic domain
Parent: e1a8oA1
Range: f:149-231
PDB: 1vv6
PDB Description:
Hsap BLAST neighbor: P63145
Species:

Structure of domain e1vv6f1

Domains in the same chain:

Download Pymol

e1vv6f2 f:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6f1 f:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C

Domains in the same PDB:

e1vv602 0:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv601 0:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv612 1:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv611 1:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv623 2:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv624 2:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6a2 a:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6a1 a:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6A2 A:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6A1 A:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6b2 b:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6b1 b:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6B2 B:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6B1 B:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6c2 c:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6c1 c:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6C2 C:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6C1 C:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6d2 d:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6d1 d:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6D2 D:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6D1 D:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6e2 e:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6e1 e:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6E2 E:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6E1 E:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6f2 f:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6f1 f:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6F2 F:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6F1 F:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6g2 g:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6g1 g:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6G2 G:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6G1 G:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6h2 h:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6h1 h:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6H2 H:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6H1 H:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6i2 i:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6i1 i:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6I2 I:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6I1 I:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6j2 j:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6j1 j:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6J2 J:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6J1 J:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6k2 k:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6k1 k:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6K2 K:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6K1 K:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6l2 l:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6l1 l:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6L2 L:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6L1 L:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6m2 m:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6m1 m:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6M2 M:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6M1 M:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6n2 n:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6n1 n:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6N2 N:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6N1 N:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6o2 o:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6o1 o:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6O2 O:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6O1 O:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6p2 p:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6p1 p:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6P2 P:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6P1 P:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6q2 q:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6q1 q:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6Q2 Q:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6Q1 Q:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6r2 r:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6r1 r:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6R2 R:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6R1 R:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6s2 s:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6s1 s:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6S2 S:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6S1 S:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6t2 t:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6t1 t:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6T2 T:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6T1 T:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6u2 u:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6u1 u:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6U2 U:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6U1 U:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6v2 v:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6v1 v:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6V2 V:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6V1 V:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6w2 w:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6w1 w:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6W2 W:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6W1 W:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6x2 x:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6x1 x:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6X2 X:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6X1 X:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6y2 y:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6y1 y:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6Y2 Y:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6Y1 Y:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6z2 z:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6z1 z:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vv6Z2 Z:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vv6Z1 Z:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C

Structural contacts of domain e1vv6f1 of H-group "Retrovirus capsid protein-C":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vv6g1 f:X,Y,Z->g:x,y,z Retrovirus capsid protein-C Interaction Interface Pymol
e1vv6e2 f:X,Y,Z->e:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol