Domain ID e1vvaS2

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  • A: alpha bundles
  • X: Retrovirus capsid protein
  • H: Retrovirus capsid protein N-terminal domain
  • T: Retrovirus capsid protein N-terminal domain
  • F: Gag_p24
UID: 001008094
Type: Automatic domain
Parent: e2pxrC1
Range: S:1-148
PDB: 1vva
PDB Description:
Species:

Structure of domain e1vvaS2

Domains in the same chain:

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e1vvaS2 S:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaS1 S:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C

Domains in the same PDB:

e1vva02 0:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vva01 0:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vva12 1:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vva11 1:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vva22 2:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vva21 2:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaa2 a:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaa1 a:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaA2 A:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaA1 A:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvab2 b:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvab1 b:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaB2 B:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaB1 B:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvac2 c:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvac1 c:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaC2 C:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaC1 C:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvad2 d:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvad1 d:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaD2 D:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaD1 D:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvae2 e:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvae1 e:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaE2 E:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaE1 E:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaf2 f:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaf1 f:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaF2 F:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaF1 F:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvag2 g:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvag1 g:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaG2 G:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaG1 G:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvah2 h:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvah1 h:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaH2 H:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaH1 H:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvai2 i:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvai1 i:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaI2 I:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaI1 I:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaj2 j:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaj1 j:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaJ2 J:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaJ1 J:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvak2 k:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvak1 k:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaK2 K:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaK1 K:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vval2 l:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vval1 l:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaL2 L:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaL1 L:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvam2 m:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvam1 m:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaM3 M:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaM4 M:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvan2 n:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvan1 n:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaN2 N:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaN1 N:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvao2 o:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvao1 o:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaO2 O:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaO1 O:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvap2 p:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvap1 p:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaP2 P:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaP1 P:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaq2 q:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaq1 q:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaQ2 Q:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaQ1 Q:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvar2 r:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvar1 r:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaR2 R:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaR1 R:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvas2 s:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvas1 s:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaS2 S:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaS1 S:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvat2 t:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvat1 t:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaT3 T:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaT4 T:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvau2 u:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvau1 u:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaU2 U:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaU1 U:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvav3 v:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvav4 v:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaV2 V:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaV1 V:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaw2 w:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaw1 w:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaW2 W:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaW1 W:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvax2 x:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvax1 x:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaX2 X:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaX1 X:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvay2 y:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvay1 y:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaY2 Y:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaY1 Y:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaz2 z:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaz1 z:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e1vvaZ3 Z:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e1vvaZ4 Z:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C

Structural contacts of domain e1vvaS2 of H-group "Retrovirus capsid protein N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vvaR2 S:X,Y,Z->R:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e1vvaT4 S:x,y,z->T:X,Y,Z Retrovirus capsid protein-C Interaction Interface Pymol
e1vvaT3 S:x,y,z->T:X,Y,Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol