ECOD: domain e1vvk81

Domain ID e1vvk81

A: extended segments
X: Sec-beta subunit
H: Sec-beta subunit
T: Sec-beta subunit
F: Sec61_beta

UID:	001113016
Type:	Automatic domain
Parent:	e1rh5C1
Range:	8:21-52
PDB:	1vvk
PDB Description:
Species:

Domain
In chain context
In PDB context

Structure of domain e1vvk81

Domains in the same chain:

Download Pymol

e1vvk81	8:21-52	Sec-beta subunit	Sec-beta subunit	Sec-beta subunit

Domains in the same PDB:

e1vvk71	7:2-66	Preprotein translocase SecE subunit	Preprotein translocase SecE subunit	Preprotein translocase SecE subunit
e1vvk81	8:21-52	Sec-beta subunit	Sec-beta subunit	Sec-beta subunit
e1vvkf1	f:1-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e1vvkQ1	Q:1-54	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e1vvkQ2	Q:55-150	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e1vvkS1	S:6-155	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e1vvkT1	T:3-86	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e1vvkU1	U:1-121	SH3	SH3	SH3
e1vvkW1	W:1-66	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e1vvkX1	X:2-433	Preprotein translocase SecY subunit	Preprotein translocase SecY subunit	Preprotein translocase SecY subunit

Structural contacts of domain e1vvk81 of H-group "Sec-beta subunit":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1vvkX1	8:x,y,z->X:X,Y,Z	Preprotein translocase SecY subunit	Interaction Interface Pymol
e1vvk71	8:X,Y,Z->7:x,y,z	Preprotein translocase SecE subunit	Interaction Interface Pymol