Domain ID e1vw451

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  • A: alpha arrays
  • X: RNase III catalytic domain-like
  • H: RNase III catalytic domain-like
  • T: RNase III catalytic domain-like
  • F: Ribonuclease_3
UID: 001285316
Type: Automatic domain
Parent: e1u61A1
Range: 5:65-298
PDB: 1vw4
PDB Description:
Species:

Structure of domain e1vw451

Domains in the same chain:

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e1vw451 5:65-298 RNase III catalytic domain-like RNase III catalytic domain-like RNase III catalytic domain-like
e1vw452 5:299-390 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like

Domains in the same PDB:

e1vw401 0:56-93 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e1vw441 4:2-139 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e1vw451 5:65-298 RNase III catalytic domain-like RNase III catalytic domain-like RNase III catalytic domain-like
e1vw452 5:299-390 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e1vw471 7:41-146 Glucose permease domain IIB-like eIF1-like eIF1-like
e1vw491 9:29-241 RNase III catalytic domain-like RNase III catalytic domain-like RNase III catalytic domain-like
e1vw4E1 E:19-292 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e1vw4F2 F:18-117 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1vw4F1 F:118-212 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1vw4G1 G:10-64 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e1vw4H1 H:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e1vw4I1 I:1-138 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e1vw4J1 J:58-277 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e1vw4K1 K:38-232 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e1vw4M1 M:39-166 SH3 SH3 SH3
e1vw4N1 N:44-161 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e1vw4O1 O:86-309 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e1vw4S1 S:22-171 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e1vw4U1 U:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e1vw4W1 W:72-183 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e1vw4Y1 Y:61-105 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e1vw4Z1 Z:54-115 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p

Structural contacts of domain e1vw451 of H-group "RNase III catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vw441 5:X,Y,Z->4:x,y,z Thioredoxin-like Interaction Interface Pymol
e1vw491 5:x,y,z->9:X,Y,Z RNase III catalytic domain-like Interaction Interface Pymol
e1vw4O1 5:X,Y,Z->O:x,y,z Ribosomal protein L22 Interaction Interface Pymol
e1vw4H1 5:X,Y,Z->H:x,y,z Ribosomal protein L13 and L16-A Interaction Interface Pymol