| UID: | 000087747 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1vybA1 |
| Range: | B:6-238 |
| Ligands: | SO3 SO4 |
| PDB: | 1vyb |
| PDB Description: | ORF2 CONTAINS A REVERSE TRANSCRIPTASE DOMAIN |
| UniProt: | Q8TE30 |
| Hsap BLAST neighbor: | O00370 |
| Species: | Homo sapiens |
Structure of domain e1vybB1
Domains in the same chain:
| e1vybB1 | B:6-238 | Carbon-nitrogen hydrolase-like | DNase I-like | DNase I-like |
Domains in the same PDB:
| e1vybA1 | A:3-238 | Carbon-nitrogen hydrolase-like | DNase I-like | DNase I-like |
| e1vybB1 | B:6-238 | Carbon-nitrogen hydrolase-like | DNase I-like | DNase I-like |
Structural contacts of domain e1vybB1 of H-group "DNase I-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1vybA1 | B:-X-1/2,Y-1/2,-Z+1->A:x,y,z | DNase I-like | Interaction Interface Pymol |
| e1vybA1 | B:x,y,z->A:X,Y,Z | DNase I-like | Interaction Interface Pymol |
| e1vybA1 | B:-X-1/2,Y-1/2,-Z->A:x,y,z | DNase I-like | Interaction Interface Pymol |
| e1vybA1 | B:X,Y,Z-1->A:x,y,z | DNase I-like | Interaction Interface Pymol |
| e1vybB1 | B:x,y,z->B:X-1/2,-Y+7/2,-Z+1 | DNase I-like | Interaction Interface Pymol |
| e1vybB1 | B:X-1/2,-Y+7/2,-Z+1->B:x,y,z | DNase I-like | Interaction Interface Pymol |
| e1vybB1 | B:x,y,z->B:X,Y,Z-1 | DNase I-like | Interaction Interface Pymol |
| e1vybB1 | B:X,Y,Z-1->B:x,y,z | DNase I-like | Interaction Interface Pymol |
