Domain ID e1w2w.1

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: NagB/RpiA/CoA transferase-like
  • F: IF-2B
UID: 000236544
Type: Manual and representative domain
Range: A:150-211,B:221-411
Ligands: SO4
PDB: 1w2w
PDB Description: 5-METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE
UniProt: Q06489
Hsap BLAST neighbor: Q9BV20
Species:

Structure of domain e1w2w.1

Domains in the same chain:

e1w2wA1 A:1-149 Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain
e1w2w.1 A:150-211,B:221-411 Rossmann-like Rossmann-related NagB/RpiA/CoA transferase-like

Domains in the same PDB:

e1w2wA1 A:1-149 Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain
e1w2w.1 A:150-211,B:221-411 Rossmann-like Rossmann-related NagB/RpiA/CoA transferase-like
e1w2wE1 E:1-211 Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain
e1w2wF1 F:221-411 Rossmann-like Rossmann-related NagB/RpiA/CoA transferase-like
e1w2wI1 I:1-211 Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain
e1w2wJ1 J:221-411 Rossmann-like Rossmann-related NagB/RpiA/CoA transferase-like
e1w2wM1 M:2-211 Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain Translation initiation factor eIF-2B delta subunit N-terminal helical domain
e1w2wN1 N:221-411 Rossmann-like Rossmann-related NagB/RpiA/CoA transferase-like

Structural contacts of domain e1w2w.1 of H-group "Rossmann-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1w2w.1 B:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e1w2wA1 B:x,y,z->A:X,Y,Z Translation initiation factor eIF-2B delta subunit N-terminal helical domain Interaction Interface Pymol
e1w2w.1 A:X,Y,Z->B:x,y,z Rossmann-related Interaction Interface Pymol
e1w2wN1 B:X,Y,Z->N:x,y,z Rossmann-related Interaction Interface Pymol
e1w2wM1 B:x,y,z->M:X-1,Y,Z Translation initiation factor eIF-2B delta subunit N-terminal helical domain Interaction Interface Pymol
e1w2wF1 B:X-1/2,-Y+1/2,-Z->F:x,y,z Rossmann-related Interaction Interface Pymol
e1w2wM1 B:x,y,z->M:X,Y,Z Translation initiation factor eIF-2B delta subunit N-terminal helical domain Interaction Interface Pymol
e1w2wA1 B:X-1,Y,Z->A:x,y,z Translation initiation factor eIF-2B delta subunit N-terminal helical domain Interaction Interface Pymol
e1w2wM1 B:-X+2,Y-1/2,-Z+1/2->M:x,y,z Translation initiation factor eIF-2B delta subunit N-terminal helical domain Interaction Interface Pymol