Domain ID e1w36B3

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  • A: a/b three-layered sandwiches
  • X: Restriction endonuclease-like
  • H: Restriction endonuclease-like
  • T: Restriction endonuclease-like
  • F: PDDEXK_1
UID: 000011032
Type: Manual and representative domain
Range: B:899-1174
Ligands: CA
PDB: 1w36
PDB Description: EXODEOXYRIBONUCLEASE V BETA CHAIN
UniProt: P08394
Species: Escherichia coli

Structure of domain e1w36B3

Domains in the same chain:

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e1w36B1 B:1-485 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1w36B2 B:486-880 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1w36B3 B:899-1174 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like

Domains in the same PDB:

e1w36B1 B:1-485 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1w36B2 B:486-880 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1w36B3 B:899-1174 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e1w36C1 C:1-347 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1w36C2 C:348-817 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1w36C3 C:818-1121 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e1w36D3 D:2-109 HTH HTH winged
e1w36D4 D:110-360 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1w36D2 D:361-466,D:523-606 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1w36E1 E:1-485 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1w36E2 E:486-880 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1w36E3 E:899-1174 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e1w36F1 F:1-249,F:294-347 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1w36F2 F:348-817 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1w36F3 F:818-1121 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e1w36G3 G:2-109 HTH HTH winged
e1w36G5 G:110-349 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1w36G4 G:350-466,G:523-607 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e1w36B3 of H-group "Restriction endonuclease-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1w36C2 B:X,Y,Z->C:x,y,z P-loop domains-related Interaction Interface Pymol
e1w36C1 B:X,Y,Z->C:x,y,z P-loop domains-related Interaction Interface Pymol
e1w36G5 B:x,y,z->G:-X+1,Y-1/2,-Z+1/2 P-loop domains-related Interaction Interface Pymol
e1w36F3 B:x,y,z->F:-X+1,Y-1/2,-Z+1/2 Restriction endonuclease-like Interaction Interface Pymol
e1w36D3 B:X,Y,Z->D:x,y,z HTH Interaction Interface Pymol
e1w36E2 B:x,y,z->E:-X+1,Y-1/2,-Z+1/2 P-loop domains-related Interaction Interface Pymol