Domain ID e1w79A2

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  • A: alpha complex topology
  • X: alpha-helical domain in beta-lactamase/transpeptidase-like proteins
  • H: alpha-helical domain in beta-lactamase/transpeptidase-like proteins
  • T: alpha-helical domain in beta-lactamase/transpeptidase-like proteins
  • F: Peptidase_S13
UID: 000004895
Type: Manual and representative domain
Range: A:46-67,A:286-354
Ligands: SO4
PDB: 1w79
PDB Description: D-alanyl-D-alanine carboxypeptidase
UniProt: P39045
Species: Actinomadura sp. R39

Structure of domain e1w79A2

Domains in the same chain:

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e1w79A3 A:1-45,A:355-466 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1w79A2 A:46-67,A:286-354 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e1w79A4 A:68-164,A:240-285 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e1w79A1 A:165-239 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins

Domains in the same PDB:

e1w79A3 A:1-45,A:355-466 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1w79A2 A:46-67,A:286-354 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e1w79A4 A:68-164,A:240-285 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e1w79A1 A:165-239 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins
e1w79B3 B:1-44,B:354-465 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1w79B2 B:45-66,B:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e1w79B4 B:67-163,B:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e1w79B1 B:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins
e1w79C3 C:1-44,C:354-465 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1w79C2 C:45-66,C:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e1w79C4 C:67-163,C:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e1w79C1 C:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins
e1w79D3 D:1-44,D:354-465 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1w79D2 D:45-66,D:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e1w79D4 D:67-163,D:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e1w79D1 D:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins

Structural contacts of domain e1w79A2 of H-group "alpha-helical domain in beta-lactamase/transpeptidase-like proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1w79B1 A:x,y,z->B:X-1,Y,Z Inserted beta sandwich domain in Dac-like proteins Interaction Interface Pymol
e1w79D2 A:x,y,z->D:X,Y-1,Z alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol