Domain ID e1w8qB4

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  • A: a/b three-layered sandwiches
  • X: DTD-like
  • H: Inserted a+b domain in Dac-like proteins
  • T: Inserted a+b domain in Dac-like proteins
  • F: Peptidase_S13
UID: 000118062
Type: Automatic domain
Parent: e1w79A4
Range: B:67-163,B:239-284
Ligands: CO SO4
PDB: 1w8q
PDB Description: D-ALANYL-D-ALANINE CARBOXYPEPTIDASE
UniProt: P39045
Species: Actinomadura sp. R39

Structure of domain e1w8qB4

Domains in the same chain:

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e1w8qB3 B:1-44,B:354-465 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1w8qB2 B:45-66,B:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e1w8qB4 B:67-163,B:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e1w8qB1 B:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins

Domains in the same PDB:

e1w8qA3 A:1-44,A:354-465 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1w8qA2 A:45-66,A:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e1w8qA4 A:67-163,A:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e1w8qA1 A:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins
e1w8qB3 B:1-44,B:354-465 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1w8qB2 B:45-66,B:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e1w8qB4 B:67-163,B:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e1w8qB1 B:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins
e1w8qC3 C:1-44,C:354-465 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1w8qC2 C:45-66,C:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e1w8qC4 C:67-163,C:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e1w8qC1 C:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins
e1w8qD3 D:1-44,D:354-465 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e1w8qD2 D:45-66,D:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e1w8qD4 D:67-163,D:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e1w8qD1 D:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins

Structural contacts of domain e1w8qB4 of H-group "Inserted a+b domain in Dac-like proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1w8qC1 B:x,y,z->C:-X+1,Y-1/2,-Z Inserted beta sandwich domain in Dac-like proteins Interaction Interface Pymol
e1w8qC4 B:x,y,z->C:-X+1,Y-1/2,-Z+1 Inserted a+b domain in Dac-like proteins Interaction Interface Pymol