Domain ID e1wdlB4

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  • A: a/b three-layered sandwiches
  • X: ClpP/crotonase
  • H: ClpP/crotonase
  • T: ClpP/crotonase
  • F: ECH_1
UID: 000117443
Type: Automatic domain
Parent: e1mj3A1
Range: B:1-310
PDB: 1wdl
PDB Description: Fatty oxidation complex alpha subunit
UniProt: P28793
Hsap BLAST neighbor: P40939
Species: Pseudomonas fragi

Structure of domain e1wdlB4

Domains in the same chain:

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e1wdlB4 B:1-310 ClpP/crotonase ClpP/crotonase ClpP/crotonase
e1wdlB3 B:311-496 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1wdlB1 B:497-620 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e1wdlB2 B:621-715 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like

Domains in the same PDB:

e1wdlA4 A:1-310 ClpP/crotonase ClpP/crotonase ClpP/crotonase
e1wdlA3 A:311-496 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1wdlA1 A:497-620 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e1wdlA2 A:621-715 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e1wdlB4 B:1-310 ClpP/crotonase ClpP/crotonase ClpP/crotonase
e1wdlB3 B:311-496 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e1wdlB1 B:497-620 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e1wdlB2 B:621-715 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e1wdlC2 C:2-263 Thiolase-like Thiolase-like Thiolase-like
e1wdlC1 C:265-391 Thiolase-like Thiolase-like Thiolase-like
e1wdlD2 D:2-263 Thiolase-like Thiolase-like Thiolase-like
e1wdlD1 D:265-391 Thiolase-like Thiolase-like Thiolase-like

Structural contacts of domain e1wdlB4 of H-group "ClpP/crotonase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1wdlD2 B:X,Y,Z->D:x,y,z Thiolase-like Interaction Interface Pymol
e1wdlD1 B:X,Y,Z->D:x,y,z Thiolase-like Interaction Interface Pymol
e1wdlC2 B:X,Y,Z->C:x,y,z Thiolase-like Interaction Interface Pymol
e1wdlA2 B:x,y,z->A:-X+1/2,-Y+1,Z-1/2 6-phosphogluconate dehydrogenase C-terminal domain-like Interaction Interface Pymol
e1wdlD1 B:X-1/2,-Y+1/2,-Z->D:x,y,z Thiolase-like Interaction Interface Pymol
e1wdlD2 B:X-1/2,-Y+1/2,-Z->D:x,y,z Thiolase-like Interaction Interface Pymol
e1wdlA4 B:X-1,Y,Z->A:x,y,z ClpP/crotonase Interaction Interface Pymol