Domain ID e1wp9D3

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: Helicase_C
UID: 001573170
Type: Automatic domain
Parent: e1wp9A4
Range: D:201-212,D:339-486
PDB: 1wp9
PDB Description: ATP-dependent RNA helicase, putative
UniProt: Q8TZH8
Hsap BLAST neighbor: Q8IYD8
Species:

Structure of domain e1wp9D3

Domains in the same chain:

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e1wp9D1 D:1-200 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1wp9D3 D:201-212,D:339-486 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1wp9D2 D:213-338 Helical bundle insertion in helicase domains Helical bundle in Hef helicase Helical bundle in Hef helicase

Domains in the same PDB:

e1wp9A1 A:1-200 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1wp9A4 A:201-212,A:339-486 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1wp9A3 A:213-338 Helical bundle insertion in helicase domains Helical bundle in Hef helicase Helical bundle in Hef helicase
e1wp9B2 B:1-200 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1wp9B1 B:201-212,B:339-487 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1wp9B3 B:213-338 Helical bundle insertion in helicase domains Helical bundle in Hef helicase Helical bundle in Hef helicase
e1wp9C3 C:1-200 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1wp9C1 C:201-212,C:339-487 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1wp9C2 C:213-338 Helical bundle insertion in helicase domains Helical bundle in Hef helicase Helical bundle in Hef helicase
e1wp9D1 D:1-200 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1wp9D3 D:201-212,D:339-486 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1wp9D2 D:213-338 Helical bundle insertion in helicase domains Helical bundle in Hef helicase Helical bundle in Hef helicase
e1wp9E2 E:1-200 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1wp9E1 E:201-212,E:339-487 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1wp9E3 E:213-338 Helical bundle insertion in helicase domains Helical bundle in Hef helicase Helical bundle in Hef helicase
e1wp9F1 F:1-200 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1wp9F3 F:201-212,F:339-487 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1wp9F2 F:213-338 Helical bundle insertion in helicase domains Helical bundle in Hef helicase Helical bundle in Hef helicase

Structural contacts of domain e1wp9D3 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1wp9E2 D:X,Y,Z->E:x,y,z P-loop domains-related Interaction Interface Pymol
e1wp9C3 D:x,y,z->C:X,Y,Z P-loop domains-related Interaction Interface Pymol
e1wp9C2 D:x,y,z->C:-X+2,Y-1/2,-Z+2 Helical bundle in Hef helicase Interaction Interface Pymol