Domain ID e1wukL4

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  • A: a+b two layers
  • X: FAD-linked reductases, C-terminal domain-like
  • H: Ni-Fe binding domain in nickel-iron hydrogenase large subunit
  • T: Ni-Fe binding domain in nickel-iron hydrogenase large subunit
  • F: NiFeSe_Hases
UID: 000077081
Type: Automatic domain
Parent: e1cc1L4
Range: L:59-101,L:462-510
Ligands: MG NFO SF4
PDB: 1wuk
PDB Description: Periplasmic [NiFe] hydrogenase large subunit
UniProt: P21852
Species:

Structure of domain e1wukL4

Domains in the same chain:

e1wukL3 L:19-58,L:511-551 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e1wukL4 L:59-101,L:462-510 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e1wukL2 L:102-329,L:381-461 alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit
e1wukL1 L:330-380 all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit

Domains in the same PDB:

e1wukL3 L:19-58,L:511-551 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e1wukL4 L:59-101,L:462-510 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e1wukL2 L:102-329,L:381-461 alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit
e1wukL1 L:330-380 all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit all-beta domain in nickel-iron hydrogenase large subunit
e1wukS2 S:1-183 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e1wukS1 S:184-266 Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit

Structural contacts of domain e1wukL4 of H-group "Ni-Fe binding domain in nickel-iron hydrogenase large subunit":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1wukS1 L:x,y,z->S:X,Y,Z Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Interaction Interface Pymol
e1wukS2 L:x,y,z->S:X,Y,Z Class I glutamine amidotransferase-like Interaction Interface Pymol
e1wukS1 L:-X+3/2,-Y+1,Z-1/2->S:x,y,z Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit Interaction Interface Pymol
e1wukL2 L:-X+1,Y-1/2,-Z+5/2->L:x,y,z alpha-helical domain in nickel-iron hydrogenase, large subunit Interaction Interface Pymol
e1wukL3 L:x,y,z->L:-X+3/2,-Y+1,Z-1/2 Ni-Fe binding domain in nickel-iron hydrogenase large subunit Interaction Interface Pymol
e1wukL1 L:x,y,z->L:-X+3/2,-Y+1,Z-1/2 all-beta domain in nickel-iron hydrogenase large subunit Interaction Interface Pymol