ECOD: domain e1x9nA1

Domain ID e1x9nA1

A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins
T: Nucleic acid-binding proteins
F: DNA_ligase_A_C

UID:	000000375
Type:	Manual and representative domain
Range:	A:754-901
PDB:	1x9n
PDB Description:	DNA LIGASE I
UniProt:	P18858
Hsap BLAST neighbor:	P18858
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e1x9nA1

Domains in the same chain:

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e1x9nA2	A:262-384	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain
e1x9nA3	A:393-533	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain
e1x9nA4	A:534-753	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e1x9nA1	A:754-901	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Domains in the same PDB:

e1x9nA2	A:262-384	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain
e1x9nA3	A:393-533	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain
e1x9nA4	A:534-753	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e1x9nA1	A:754-901	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Structural contacts of domain e1x9nA1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1x9nA3	A:x,y,z->A:X-Y,X,Z-1/2	ATP-dependent DNA ligase DNA-binding domain	Interaction Interface Pymol