ECOD: domain e1xdoB3

Domain ID e1xdoB3

A: a+b three layers
X: Phospholipase D/nuclease
H: Phospholipase D/nuclease
T: Phospholipase D/nuclease
F: PP_kinase_C_1

UID:	000117201
Type:	Automatic domain
Parent:	e2o8rA3
Range:	B:315-501
PDB:	1xdo
PDB Description:	Polyphosphate kinase
UniProt:	P0A7B1
Species:	Escherichia coli

Domains in the same chain:

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e1xdoB1	B:2-106	Spectrin repeat-like	PPK N-terminal domain-like	PPK N-terminal domain-like
e1xdoB2	B:107-314	PHP14-like	PHP14-like	PHP14-like
e1xdoB3	B:315-501	Phospholipase D/nuclease	Phospholipase D/nuclease	Phospholipase D/nuclease
e1xdoB4	B:502-688	Phospholipase D/nuclease	Phospholipase D/nuclease	Phospholipase D/nuclease

Domains in the same PDB:

e1xdoA1	A:2-106	Spectrin repeat-like	PPK N-terminal domain-like	PPK N-terminal domain-like
e1xdoA2	A:107-314	PHP14-like	PHP14-like	PHP14-like
e1xdoA3	A:315-501	Phospholipase D/nuclease	Phospholipase D/nuclease	Phospholipase D/nuclease
e1xdoA4	A:502-688	Phospholipase D/nuclease	Phospholipase D/nuclease	Phospholipase D/nuclease
e1xdoB1	B:2-106	Spectrin repeat-like	PPK N-terminal domain-like	PPK N-terminal domain-like
e1xdoB2	B:107-314	PHP14-like	PHP14-like	PHP14-like
e1xdoB3	B:315-501	Phospholipase D/nuclease	Phospholipase D/nuclease	Phospholipase D/nuclease
e1xdoB4	B:502-688	Phospholipase D/nuclease	Phospholipase D/nuclease	Phospholipase D/nuclease

Structural contacts of domain e1xdoB3 of H-group "Phospholipase D/nuclease":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1xdoA2	B:x,y,z->A:X,Y,Z	PHP14-like	Interaction Interface Pymol
e1xdoA2	B:x,y,z->A:-X+2,-Y+1,Z	PHP14-like	Interaction Interface Pymol
e1xdoA3	B:x,y,z->A:-X+2,-Y+1,Z	Phospholipase D/nuclease	Interaction Interface Pymol
e1xdoA4	B:x,y,z->A:-X+2,-Y+1,Z	Phospholipase D/nuclease	Interaction Interface Pymol
e1xdoA4	B:x,y,z->A:-X+3/2,Y-1/2,-Z+1/2	Phospholipase D/nuclease	Interaction Interface Pymol