ECOD: domain e1xhkB1

Domain ID e1xhkB1

A: a+b two layers
X: Ribosomal protein S5 domain 2-like
H: Ribosomal protein S5 domain 2-like
T: Ribosomal protein S5 domain 2-like
F: Lon_C

UID:	001113231
Type:	Automatic domain
Parent:	e1xhkA2
Range:	B:454-567
Ligands:	MES SO4
PDB:	1xhk
PDB Description:	PUTATIVE PROTEASE LA HOMOLOG
UniProt:	Q58812
Species:	Methanocaldococcus jannaschii

Domains in the same chain:

Download Pymol

e1xhkB1	B:454-567	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e1xhkB2	B:568-640	C-terminal subdomain in Lon-related proteases catalytic domains	C-terminal subdomain in Lon-related proteases catalytic domains	C-terminal subdomain in Lon-related proteases catalytic domains

Domains in the same PDB:

e1xhkA2	A:456-567	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e1xhkA3	A:568-640	C-terminal subdomain in Lon-related proteases catalytic domains	C-terminal subdomain in Lon-related proteases catalytic domains	C-terminal subdomain in Lon-related proteases catalytic domains
e1xhkB1	B:454-567	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e1xhkB2	B:568-640	C-terminal subdomain in Lon-related proteases catalytic domains	C-terminal subdomain in Lon-related proteases catalytic domains	C-terminal subdomain in Lon-related proteases catalytic domains

Structural contacts of domain e1xhkB1 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1xhkA3	B:x,y,z->A:X,Y,Z	C-terminal subdomain in Lon-related proteases catalytic domains	Interaction Interface Pymol
e1xhkA2	B:x,y,z->A:-X,-Y+1,Z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e1xhkA2	B:-X+1/2,Y-1/2,-Z+1/2->A:x,y,z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e1xhkA2	B:x,y,z->A:-Y+1/2,X+1/2,Z-1/2	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e1xhkA3	B:x,y,z->A:X-1/2,-Y+3/2,-Z+1/2	C-terminal subdomain in Lon-related proteases catalytic domains	Interaction Interface Pymol
e1xhkB1	B:x,y,z->B:X-1/2,-Y+3/2,-Z+1/2	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e1xhkB2	B:x,y,z->B:X-1/2,-Y+3/2,-Z+1/2	C-terminal subdomain in Lon-related proteases catalytic domains	Interaction Interface Pymol
e1xhkB1	B:X-1/2,-Y+3/2,-Z+1/2->B:x,y,z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e1xhkA2	B:-Y+1/2,X+1/2,Z+1/2->A:x,y,z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e1xhkB1	B:x,y,z->B:-X,-Y+1,Z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e1xhkB1	B:-X,-Y+1,Z->B:x,y,z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol