| UID: | 000002986 |
|---|---|
| Type: | Manual and representative domain |
| Range: | A:186-290 |
| PDB: | 1xo1 |
| PDB Description: | 5'-EXONUCLEASE |
| UniProt: | P06229 |
| Species: | Enterobacteria phage T5 |
Structure of domain e1xo1A1
Domains in the same chain:
| e1xo1A2 | A:19-83,A:104-185 | HAD domain-like | HAD domain-related | PIN domain-like |
| e1xo1A1 | A:186-290 | HhH/H2TH | SAM/DNA-glycosylase | SAM domain-like |
Domains in the same PDB:
| e1xo1A2 | A:19-83,A:104-185 | HAD domain-like | HAD domain-related | PIN domain-like |
| e1xo1A1 | A:186-290 | HhH/H2TH | SAM/DNA-glycosylase | SAM domain-like |
| e1xo1B1 | B:19-83,B:104-185 | HAD domain-like | HAD domain-related | PIN domain-like |
| e1xo1B2 | B:186-290 | HhH/H2TH | SAM/DNA-glycosylase | SAM domain-like |
Structural contacts of domain e1xo1A1 of H-group "SAM/DNA-glycosylase":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1xo1A1 | A:-X,Y-1/2,-Z+1/2->B:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e1xo1A1 | A:-X,Y-1/2,-Z+1/2->B:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e1xo1A1 | A:-X+1,Y-1/2,-Z+1/2->B:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e1xo1A1 | A:-X+1,Y-1/2,-Z+1/2->B:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e1xo1A2 | A:x,y,z->A:-X+1,Y-1/2,-Z+1/2 | HAD domain-related | Interaction Interface Pymol |
| e1xo1A1 | A:x,y,z->A:-X+1,Y-1/2,-Z+1/2 | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e1xo1A2 | A:-X+1,Y-1/2,-Z+1/2->A:x,y,z | HAD domain-related | Interaction Interface Pymol |
| e1xo1A1 | A:-X+1,Y-1/2,-Z+1/2->A:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e1xo1A1 | A:X-1/2,-Y+1/2,-Z+1->B:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
