Domain ID e1xpuB1

Download files:
  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: Rho_RNA_bind
UID: 000023805
Type: Automatic domain
Parent: e1a62A1
Range: B:48-125
PDB: 1xpu
PDB Description: RHO TRANSCRIPTION TERMINATION FACTOR
UniProt: P0AG30
Species: Escherichia coli

Structure of domain e1xpuB1

Domains in the same chain:

Download Pymol

e1xpuB2 B:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1xpuB1 B:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1xpuB3 B:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e1xpuA2 A:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1xpuA1 A:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1xpuA3 A:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xpuB2 B:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1xpuB1 B:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1xpuB3 B:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xpuC2 C:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1xpuC1 C:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1xpuC3 C:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xpuD2 D:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1xpuD1 D:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1xpuD3 D:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xpuE6 E:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1xpuE5 E:48-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1xpuE4 E:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xpuF2 F:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1xpuF1 F:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1xpuF3 F:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e1xpuB1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1xpuC2 B:X,Y,Z->C:x,y,z LEM/SAP HeH motif Interaction Interface Pymol
e1xpuF2 B:x,y,z->F:X-1,Y,Z LEM/SAP HeH motif Interaction Interface Pymol
e1xpuF3 B:x,y,z->F:X-1,Y,Z P-loop domains-related Interaction Interface Pymol
e1xpuF2 B:-X,Y,-Z->F:x,y,z LEM/SAP HeH motif Interaction Interface Pymol
e1xpuE4 B:x,y,z->E:X-1,Y,Z P-loop domains-related Interaction Interface Pymol