Domain ID e1xsiD4

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_31_2nd
UID: 000095353
Type: Automatic domain
Parent: e2f2hA4
Range: D:248-585
Ligands: SO4
PDB: 1xsi
PDB Description: Putative family 31 glucosidase yicI
UniProt: P31434
Hsap BLAST neighbor: Q14697
Species: Escherichia coli

Structure of domain e1xsiD4

Domains in the same chain:

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e1xsiD2 D:1-247 Glycosyl hydrolase domain-like supersandwich supersandwich
e1xsiD4 D:248-585 TIM beta/alpha-barrel TIM barrels TIM barrels
e1xsiD1 D:586-665 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e1xsiD3 D:666-773 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain

Domains in the same PDB:

e1xsiA2 A:1-247 Glycosyl hydrolase domain-like supersandwich supersandwich
e1xsiA4 A:248-585 TIM beta/alpha-barrel TIM barrels TIM barrels
e1xsiA1 A:586-665 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e1xsiA3 A:666-773 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain
e1xsiB2 B:1-247 Glycosyl hydrolase domain-like supersandwich supersandwich
e1xsiB4 B:248-585 TIM beta/alpha-barrel TIM barrels TIM barrels
e1xsiB1 B:586-665 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e1xsiB3 B:666-773 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain
e1xsiC2 C:1-247 Glycosyl hydrolase domain-like supersandwich supersandwich
e1xsiC4 C:248-585 TIM beta/alpha-barrel TIM barrels TIM barrels
e1xsiC1 C:586-665 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e1xsiC3 C:666-773 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain
e1xsiD2 D:1-247 Glycosyl hydrolase domain-like supersandwich supersandwich
e1xsiD4 D:248-585 TIM beta/alpha-barrel TIM barrels TIM barrels
e1xsiD1 D:586-665 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e1xsiD3 D:666-773 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain
e1xsiE2 E:1-247 Glycosyl hydrolase domain-like supersandwich supersandwich
e1xsiE4 E:248-585 TIM beta/alpha-barrel TIM barrels TIM barrels
e1xsiE1 E:586-665 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e1xsiE3 E:666-773 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain
e1xsiF2 F:1-247 Glycosyl hydrolase domain-like supersandwich supersandwich
e1xsiF4 F:248-585 TIM beta/alpha-barrel TIM barrels TIM barrels
e1xsiF1 F:586-665 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e1xsiF3 F:666-773 Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain Putative glucosidase YicI, C-terminal domain

Structural contacts of domain e1xsiD4 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1xsiA2 D:x,y,z->A:X,Y,Z supersandwich Interaction Interface Pymol
e1xsiE2 D:X,Y,Z->E:x,y,z supersandwich Interaction Interface Pymol
e1xsiE4 D:X-1/2,-Y+3/2,-Z+1->E:x,y,z TIM barrels Interaction Interface Pymol
e1xsiE3 D:X-1/2,-Y+3/2,-Z+1->E:x,y,z Putative glucosidase YicI, C-terminal domain Interaction Interface Pymol
e1xsiE1 D:X-1/2,-Y+3/2,-Z+1->E:x,y,z Glycosyl hydrolase domain Interaction Interface Pymol
e1xsiB3 D:x,y,z->B:-X+3/2,-Y+1,Z-1/2 Putative glucosidase YicI, C-terminal domain Interaction Interface Pymol