Domain ID e1xxiA3

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: DNA_pol3_delta
UID: 000102734
Type: Automatic domain
Parent: e1jqlB1
Range: A:1-141
PDB: 1xxi
PDB Description: DNA POLYMERASE III, DELTA SUBUNIT
UniProt: P28630
Species: Escherichia coli

Structure of domain e1xxiA3

Domains in the same chain:

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e1xxiA3 A:1-141 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xxiA2 A:142-210 Histone-like Histone-related AAA+ ATPase lid domain
e1xxiA1 A:212-338 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain

Domains in the same PDB:

e1xxiA3 A:1-141 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xxiA2 A:142-210 Histone-like Histone-related AAA+ ATPase lid domain
e1xxiA1 A:212-338 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e1xxiB4 B:5-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xxiB3 B:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e1xxiB1 B:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e1xxiC4 C:3-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xxiC3 C:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e1xxiC1 C:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e1xxiD4 D:5-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xxiD3 D:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e1xxiD1 D:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e1xxiE3 E:1-165 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xxiE4 E:166-207 Histone-like Histone-related AAA+ ATPase lid domain
e1xxiE2 E:208-334 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e1xxiF3 F:1-141 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xxiF2 F:142-210 Histone-like Histone-related AAA+ ATPase lid domain
e1xxiF1 F:212-338 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e1xxiG2 G:5-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xxiG3 G:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e1xxiG1 G:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e1xxiH2 H:3-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xxiH3 H:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e1xxiH1 H:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e1xxiI4 I:5-178 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xxiI3 I:177-243 Histone-like Histone-related AAA+ ATPase lid domain
e1xxiI1 I:243-368 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain
e1xxiJ4 J:1-165 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xxiJ3 J:166-207 Histone-like Histone-related AAA+ ATPase lid domain
e1xxiJ2 J:208-334 DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain DNA polymerase III clamp loader subunits, C-terminal domain

Structural contacts of domain e1xxiA3 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1jqlB1 A:x,y,z->B:X,Y,Z P-loop domains-related Interaction Interface Pymol
e1xxiF1 A:X,Y,Z->F:x,y,z DNA polymerase III clamp loader subunits, C-terminal domain Interaction Interface Pymol
e1xxiF2 A:X,Y,Z->F:x,y,z Histone-related Interaction Interface Pymol
e1xxiF2 A:x,y,z->D:X,Y-1,Z Histone-related Interaction Interface Pymol
e1xxiG1 A:x,y,z->G:X,Y,Z DNA polymerase III clamp loader subunits, C-terminal domain Interaction Interface Pymol