ECOD: domain e1y1mA1

Domain ID e1y1mA1

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: Unmapped domains

UID:	001523214
Type:	Automatic domain
Parent:	e1pb7A2
Range:	A:144-248
Ligands:	AC5
PDB:	1y1m
PDB Description:	Glutamate [NMDA] receptor subunit zeta 1
UniProt:	P35439
Hsap BLAST neighbor:	Q05586
Species:	Rattus norvegicus

Domain
In chain context
In PDB context

Structure of domain e1y1mA1

Domains in the same chain:

Download Pymol

e1y1mA2	A:5-143,A:249-285	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e1y1mA1	A:144-248	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e1y1mA2	A:5-143,A:249-285	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e1y1mA1	A:144-248	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e1y1mB2	B:5-143,B:249-285	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e1y1mB1	B:144-248	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e1y1mA1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1y1mB2	A:X,Y,Z->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e1y1mA2	A:X-1,Y,Z->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol