Domain ID e1y1oB1

Download files:
  • A: a/b three-layered sandwiches
  • X: Restriction endonuclease-like
  • H: Restriction endonuclease-like
  • T: Restriction endonuclease-like
  • F: RecU
UID: 000114334
Type: Automatic domain
Parent: e1y1oA1
Range: B:31-198
Ligands: SO4
PDB: 1y1o
PDB Description: PENICILLIN-BINDING PROTEIN-RELATED FACTOR A
UniProt: Q5KXY4
Species: Geobacillus stearothermophilus

Structure of domain e1y1oB1

Structural contacts of domain e1y1oB1 of H-group "Restriction endonuclease-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1y1oA1 B:x,y,z->A:X,Y,Z Restriction endonuclease-like Interaction Interface Pymol
e1y1oD1 B:x,y,z->D:X,Y-1,Z Restriction endonuclease-like Interaction Interface Pymol
e1y1oA1 B:X-1/2,-Y+1/2,-Z->A:x,y,z Restriction endonuclease-like Interaction Interface Pymol
e1y1oD1 B:-X+1/2,-Y+1,Z-1/2->D:x,y,z Restriction endonuclease-like Interaction Interface Pymol
e1y1oD1 B:x,y,z->D:-X,Y-1/2,-Z+1/2 Restriction endonuclease-like Interaction Interface Pymol
e1y1oC1 B:x,y,z->C:-X,Y-1/2,-Z+1/2 Restriction endonuclease-like Interaction Interface Pymol
e1y1oC1 B:X,Y,Z->C:x,y,z Restriction endonuclease-like Interaction Interface Pymol
e1y1oC1 B:x,y,z->C:-X+1,Y-1/2,-Z+1/2 Restriction endonuclease-like Interaction Interface Pymol
e1y1oC1 B:x,y,z->C:X,Y-1,Z Restriction endonuclease-like Interaction Interface Pymol