Domain ID e1y1rD1

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  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: PNP_UDP_1
UID: 000290831
Type: Automatic domain
Parent: e3pnpA1
Range: D:3004-3253
Ligands: ANU PO4
PDB: 1y1r
PDB Description: Uridine phosphorylase
UniProt: P0A1F6
Hsap BLAST neighbor: O95045
Species:

Structure of domain e1y1rD1

Structural contacts of domain e1y1rD1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1y1rB1 D:x,y,z->B:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1y1rC1 D:x,y,z->C:X,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1y1rF1 D:X,Y,Z->F:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1y1rE1 D:X,Y,Z->E:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1y1rC1 D:X-1/2,-Y+1/2,-Z+1->C:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1y1rF1 D:x,y,z->F:-X,Y-1/2,-Z+3/2 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol