Domain ID e1y2mD3

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  • A: alpha arrays
  • X: L-aspartase middle domain-like
  • H: L-aspartase middle domain-like
  • T: L-aspartase middle domain-like
  • F: Lyase_aromatic
UID: 001194716
Type: Automatic domain
Parent: e1gkmA1
Range: D:272-539,D:646-716
PDB: 1y2m
PDB Description: PHENYLALANINE AMMONIA-LYASE
UniProt: P11544
Hsap BLAST neighbor: P42357
Species: Rhodosporidium toruloides

Structure of domain e1y2mD3

Domains in the same chain:

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e1y2mD1 D:26-103,D:124-271 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1y2mD3 D:272-539,D:646-716 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1y2mD5 D:538-651 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Domains in the same PDB:

e1y2mA2 A:26-102,A:124-271 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1y2mA3 A:272-539,A:646-715 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1y2mA1 A:538-651 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e1y2mB4 B:26-271 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1y2mB6 B:272-539,B:646-716 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1y2mB5 B:538-651 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e1y2mC2 C:26-103,C:125-271 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1y2mC3 C:272-539,C:646-716 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1y2mC1 C:538-651 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e1y2mD1 D:26-103,D:124-271 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e1y2mD3 D:272-539,D:646-716 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e1y2mD5 D:538-651 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Structural contacts of domain e1y2mD3 of H-group "L-aspartase middle domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1y2mB4 D:x,y,z->B:X,Y,Z L-aspartase N-terminal domain-like Interaction Interface Pymol
e1y2mB6 D:x,y,z->B:X,Y,Z L-aspartase middle domain-like Interaction Interface Pymol
e1y2mC3 D:x,y,z->C:X,Y,Z L-aspartase middle domain-like Interaction Interface Pymol
e1y2mC2 D:x,y,z->C:X,Y,Z L-aspartase N-terminal domain-like Interaction Interface Pymol
e1y2mA3 D:x,y,z->A:X,Y,Z L-aspartase middle domain-like Interaction Interface Pymol
e1y2mA1 D:x,y,z->A:X,Y,Z L-aspartase C-terminal domain-like Interaction Interface Pymol
e1y2mB5 D:x,y,z->B:X-1,Y,Z L-aspartase C-terminal domain-like Interaction Interface Pymol