Domain ID e1y42X1

Download files:
  • A: a/b three-layered sandwiches
  • X: HUP domain-like
  • H: HUP domains
  • T: HUP domains
  • F: tRNA-synt_1b
UID: 000187737
Type: Automatic domain
Parent: e1jilA1
Range: X:39-419
Ligands: TYR
PDB: 1y42
PDB Description: Tyrosyl-tRNA synthetase, mitochondrial
UniProt: P12063
Hsap BLAST neighbor: Q9Y2Z4
Species: Neurospora crassa

Structure of domain e1y42X1

Domains in the same chain:

e1y42X1 X:39-419 HUP domain-like HUP domains HUP domains

Domains in the same PDB:

e1y42X1 X:39-419 HUP domain-like HUP domains HUP domains

Structural contacts of domain e1y42X1 of H-group "HUP domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1y42X1 X:x,y,z->X:-X+1,Y,-Z+1 HUP domains Interaction Interface Pymol
e1y42X1 X:-X+1,Y,-Z+1->X:x,y,z HUP domains Interaction Interface Pymol
e1y42X1 X:x,y,z->X:-X+1/2,Y-1/2,-Z HUP domains Interaction Interface Pymol
e1y42X1 X:-X+1/2,Y-1/2,-Z->X:x,y,z HUP domains Interaction Interface Pymol
e1y42X1 X:x,y,z->X:-X,Y,-Z HUP domains Interaction Interface Pymol
e1y42X1 X:-X,Y,-Z->X:x,y,z HUP domains Interaction Interface Pymol
e1y42X1 X:x,y,z->X:X,Y,Z-1 HUP domains Interaction Interface Pymol
e1y42X1 X:X,Y,Z-1->X:x,y,z HUP domains Interaction Interface Pymol