| UID: | 000278047 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1j8bA1 |
| Range: | B:12-103 |
| Ligands: | UNX |
| PDB: | 1ybx |
| PDB Description: | Conserved hypothetical protein |
| UniProt: | A3DHB8 |
| Species: | Ruminiclostridium thermocellum |
Structure of domain e1ybxB1
Domains in the same chain:
| e1ybxB1 | B:12-103 | Ribonuclease PH domain 2-like | YbaB | YbaB |
Domains in the same PDB:
| e1ybxA1 | A:13-103 | Ribonuclease PH domain 2-like | YbaB | YbaB |
| e1ybxB1 | B:12-103 | Ribonuclease PH domain 2-like | YbaB | YbaB |
Structural contacts of domain e1ybxB1 of H-group "YbaB":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1ybxA1 | B:x,y,z->A:X,Y,Z | YbaB | Interaction Interface Pymol |
| e1ybxA1 | B:x,y,z->A:-X,Y-1/2,-Z+2 | YbaB | Interaction Interface Pymol |
| e1ybxA1 | B:x,y,z->A:-X+1,Y-1/2,-Z+2 | YbaB | Interaction Interface Pymol |
| e1ybxA1 | B:x,y,z->A:-X+1,Y-1/2,-Z+3 | YbaB | Interaction Interface Pymol |
| e1ybxA1 | B:x,y,z->A:X,Y-1,Z | YbaB | Interaction Interface Pymol |
| e1ybxA1 | B:x,y,z->A:-X,Y-1/2,-Z+1 | YbaB | Interaction Interface Pymol |
| e1ybxB1 | B:x,y,z->B:-X,Y-1/2,-Z+1 | YbaB | Interaction Interface Pymol |
| e1ybxB1 | B:-X,Y-1/2,-Z+1->B:x,y,z | YbaB | Interaction Interface Pymol |
